Analysis of RNA crosslinking data for RNA structure prediction. The package is suitable for the analysis of RNA structure cross-linking data and chemical probing data.
Version: | 0.1.4 |
Depends: | seqinr, GenomicRanges, stats |
Imports: | ggplot2, reshape2, MASS, mixtools, utils, S4Vectors, patchwork, doParallel, igraph, R4RNA, RColorBrewer, IRanges, foreach, grDevices, heatmap3, TopDom, tidyverse, RRNA, ggrepel, methods, parallel, ClassDiscovery |
Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0) |
Published: | 2024-07-10 |
DOI: | 10.32614/CRAN.package.rnaCrosslinkOO |
Author: | Jonathan Price [aut, cre], Andrew Lim [ctb] |
Maintainer: | Jonathan Price <jlp76 at cam.ac.uk> |
BugReports: | https://github.com/JLP-BioInf/rnaCrosslinkOO/issues |
License: | GPL-3 |
NeedsCompilation: | no |
Citation: | rnaCrosslinkOO citation info |
Materials: | README |
CRAN checks: | rnaCrosslinkOO results |
Reference manual: | rnaCrosslinkOO.pdf |
Vignettes: |
rnaCrosslinksOO |
Package source: | rnaCrosslinkOO_0.1.4.tar.gz |
Windows binaries: | r-devel: rnaCrosslinkOO_0.1.4.zip, r-release: rnaCrosslinkOO_0.1.4.zip, r-oldrel: not available |
macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): rnaCrosslinkOO_0.1.4.tgz, r-oldrel (x86_64): not available |
Old sources: | rnaCrosslinkOO archive |
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