Automated compound deconvolution, alignment across samples, and identification of metabolites by spectral library matching in Gas Chromatography - Mass spectrometry (GC-MS) untargeted metabolomics. Outputs a table with compound names, matching scores and the integrated area of the compound for each sample. Package implementation is described in Domingo-Almenara et al. (2016) <doi:10.1021/acs.analchem.6b02927>.
Version: | 2.0.1 |
Depends: | R (≥ 3.4) |
Imports: | osd, HiClimR, igraph, signal, quantreg, methods, tibble, progress, future, furrr |
Suggests: | ncdf4, mzR, knitr, rmarkdown, prettydoc, covr, gcspikelite, testthat |
Published: | 2023-12-20 |
DOI: | 10.32614/CRAN.package.erah |
Author: | Xavier Domingo-Almenara [aut, cre, cph], Jasen P. Finch [ctb], Adria Olomi [ctb], Sara Samino [aut], Maria Vinaixa [aut], Alexandre Perera [aut, ths], Jesus Brezmes [aut, ths], Oscar Yanes [aut, ths] |
Maintainer: | Xavier Domingo-Almenara <xavier.domingoa at eurecat.org> |
BugReports: | https://github.com/xdomingoal/erah-devel/issues |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
URL: | http://metsyslab.com/, http://xdomingoal.github.io/erah-devel/ |
NeedsCompilation: | yes |
Citation: | erah citation info |
Materials: | NEWS |
In views: | Omics |
CRAN checks: | erah results |
Reference manual: | erah.pdf |
Vignettes: |
eRah Manual |
Package source: | erah_2.0.1.tar.gz |
Windows binaries: | r-devel: erah_2.0.1.zip, r-release: erah_2.0.1.zip, r-oldrel: erah_2.0.1.zip |
macOS binaries: | r-release (arm64): erah_2.0.1.tgz, r-oldrel (arm64): erah_2.0.1.tgz, r-release (x86_64): erah_2.0.1.tgz, r-oldrel (x86_64): erah_2.0.1.tgz |
Old sources: | erah archive |
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