Functions for identifying, fitting, and applying continuous-time stochastic models to phylogenetic data. The package is based on methods introduced in Noonan et al. (2021) <doi:10.1101/2021.05.21.445056>.
Version: | 1.0.1 |
Depends: | R (≥ 3.5.0), ape, ctmm |
Imports: | slouch, ClusterR, methods, stats, utils |
Suggests: | phytools, viridis, knitr, rmarkdown, nlme, progress, graphics, grDevices |
Published: | 2021-11-08 |
DOI: | 10.32614/CRAN.package.ctpm |
Author: | Michael J. Noonan [aut, cre], Christen H. Fleming [aut] |
Maintainer: | Michael J. Noonan <michael.noonan at ubc.ca> |
License: | GPL-3 |
URL: | https://github.com/NoonanM/ctpm, |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | ctpm results |
Reference manual: | ctpm.pdf |
Vignettes: |
Variogram |
Package source: | ctpm_1.0.1.tar.gz |
Windows binaries: | r-devel: ctpm_1.0.1.zip, r-release: ctpm_1.0.1.zip, r-oldrel: ctpm_1.0.1.zip |
macOS binaries: | r-release (arm64): ctpm_1.0.1.tgz, r-oldrel (arm64): ctpm_1.0.1.tgz, r-release (x86_64): ctpm_1.0.1.tgz, r-oldrel (x86_64): ctpm_1.0.1.tgz |
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